//June 11, 2006

A general outline of my first thesis of EEC

Evolution of Electronic Creature (How it works, and how it will work.)

1.    Introduction: Hi! Want to create your own world?

2.    Feasibility: Simulation of nature & computer. (How does our nature & computer work?)

3.    Goal: Out of your imagination.

4.    Summary of Part I: First thing’s first

5.    Overall of Data structure & Arithmetic frame. (Hard work: What is we need?)

6.    Prisoners’ dilemma: Fish’s funny puzzle. (Game theory & Nash equilibrium)

7.    Codon List and CPU repertoire. (Write your own RNA!)

8.    Fish’s data. (Your Adam.)

9.    Ev data & regulars. (Let there be light.)

10.   Heredity & aberrance. (Evolution comes from here)

11.   EE Program: We are go for launch!

12.   Experiments: Let’s breed!

13.   Conclusions. (See our achievements)

14.   Philosophy: (God: ourselves?)

15.   Expectation: (I have a dream.)

我的第一篇電子生物論文之大綱[繁體中文版]

電子生物進化方案（如何運轉以及將如何運轉）

1.     引言：你好！想要創造一個你自己的世界？

2.     可行性：自然界與電腦的相似性（我們的自然和電腦如何工作？）

3.     目標：超乎想象

4.     第一部分概說：萬丈高樓平地起

5.     資料結構與演算法框架總攬（艱難的工作：我們需要什麽？）

6.     囚徒困境：魚類有趣的困惑（博弈論與納什均衡）

7.     密碼子表與指令系統（編寫你自己的RNA！）

8.     魚的資料（女媧造人）

9.     環境資料與規則（盤穀開天）

10.   遺傳與變異（進化自爾起）

11.   電子生物程式：只欠東風！

12.   實驗：開始培育！

13.   結論：（看看我們的成就）

14.   哲學：（上帝：我們自己？）

15.   展望：吾將上下而求索

See a graph:

It shows the relations between “~or”(SR2 Editor, RNA&DE Editor, RNA translator and Environment Processor) and data (SR2, SE, DE and DR). Each line means the information flow from arrowfoot to arrowhead.

It’s really beautiful, is it?

Arithmetic frame:

unit SR2;

type

  //structure of DR1

  ...

  //structure of DR2(RNA)

  ...

var

  ...

begin

  ...

  Case DR2 of

  000000(AAA):

        begin

          ...

        end;

  000001(AAU):

        begin

          ...

        end;

  ...

  end;

program Main (Output);

uses SR2 (List of Codon) , Environment Processor;

type

  creature = record

               RNA:array[1..10000] of byte; //DR2

               ...                          //DE2 

             end;

  things1 = record

              ...

            end;

  ...

var

  creatures : array[1..10000] of creature;

  thing1s   : array[1..100] of thing1;

  ...

const

  SE1 = ...

  ...

begin

  //Initialize data

  RNA&DE Editor;

  repeat

    repeat

      Environment Processor;

{

      1. Process every rules in the world (only in one unit time).

2. Process each Creature's action.

          If the action is “breed”, uses SR1 function;

}

      RNA translator;

{

       For each creature

       begin

          put DR1 in memory;

          for Num_process (How many nucleotides translate In one unit time, decided by SR2)

          begin

            according to SR2 & RNA, translate RNA->Pascal Code, and run it.

          end;

          memory write into DR1

       end;

}

      DE viewer (inside RNA&DE Editor);

    until PAUSE;

    RNA&DE Editor;

  until EXIT;

NOTE: The frame shows how whole system works. Inspire we only have one thread in it, we simulate multi-thread running. Actually, not only RNA translator and Environment Processor work independently. But also every creature translates their RNA-Pr and every thing in the world move at one time! So multi-thread is very important, But I just have one computer, which only has one CPU, what can I do? Is there something different between use multi-thread programs in my computer and simulate multi-thread?

… May be I should use network in Part III?

Evolution of Electronic Creature (Study Record, and sth. like that…)

Goal:

Part 0

0.     EE virus.(TOP SECRET)

Part 1

1.        Make a program to find a batter strategy in a certain circumstance.

2.        Make a creature exchange message with environment program.

Par 2

3.        Make a digital world all in it is 01010011~, but under Some Rules, real creatures living in.

Summary of Two Parts:

1.        Build creatures can exchange message with environment program; this creature has its own protein code that decided its all habit. It has three characters followed:

(1). Reaction rapidly with changes of environment.

(2). Adaptation.

(3). Heredity and aberrance.

This part of program has its structure of datas.

(D1). Data of creatures’ Pr.

(D2). Rule of how Pr works. (Just like CPU repertoire)

(D3). Data of environment.

In this part I will make three independent programs:

(1). CreatureMind: Give action decided by D1 to Environment.

(2). Environment: Receive and process action from CreatureMind and offer environment messages to CreatureMind.

(3). Pr maker: Use to Create a Creature’s Pr more easily.

2.        Build a digital world and a Rule that the world is running under. Creatures are made of 0101101~, and environments is also made of these numbers. In this part, creatures and environment is made of the same thing! And they are running under the same rule. So the structure of datas is reduce to this:

(D1). Data of creatures & environment.

(D2). Rule of how D1 works. (Also like CPU repertoire)

As creature and environment becomes the same thing, creatures’ structure became freer and complex; and can have real biological creature properties as follows:

(1). Reaction rapidly with changes of environment.

(2). Adaptation.

(3). Information flowing. (Metabolism)

(4). Same basic structure like cells.

(5). Heredity and aberrance.

(6). DNA->Pr

In this part I will make only two independent programs:

(1). Creature &Environment: Change world under D2.

(2). DNA maker: Use to Create a Creature’s DNA more easily.

NOTE: As you see, Part2 is expansion of Part1. And Part1 is much easier than Part2, and I am very confident about Part1, I will prove it’s right. But Part2 is much exciting than Part1, even it’s very hard to archive, I will keep running.